Insertion junction: CLIP2.057197_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057197
Chromosome:chromosome 2
Location:2406827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091193 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain 5'UTR
Cre02.g091200 (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGGAAATGTAAATGAAATTGGATGGGCCTGACATCATTGCCACGTCA
Internal bar code:GGTCGAACGGCGCAGAGATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1696
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAGTAAGGGTCTCGTTT
Suggested primer 2:CTACAGCGGCGGCAGTATAA