Insertion junction: CLIP2.057200_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057200
Chromosome:chromosome 1
Location:4132170
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027500 (1 of 2) IPR001870//IPR003877//IPR013320 - B30.2/SPRY domain // SPRY domain // Concanavalin A-like lectin/glucanase domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATCTGTGAAAGGCGTGTGTGAGGCGTGTGTTTGGTGTGGGCCTGTTG
Internal bar code:ACTAGAAATCCGGCTGTGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGGAGCAAGACACTTCTT
Suggested primer 2:CTGTGGGGTTCATGGAGACC