Insertion junction: CLIP2.057203_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057203
Chromosome:chromosome 6
Location:2110537
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g266100 (1 of 15) PTHR12291:SF23 - PROTEIN MEC-15 3'UTR
Cre06.g266150 (1 of 7) 2.7.11.1//2.7.11.17 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Calcium/calmodulin-dependent protein kinase / Microtubule-associated protein 2 kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGTAGTTCGTGACCAGATGAGCTGCATGAGCATGAGCGTTTTCACG
Internal bar code:TCAGTTCGGAACCGCCGGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2334
LEAP-Seq percent confirming:98.9011
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGGCGTACTCAGTGTT
Suggested primer 2:ACTCGGTGTTTGAGGACGAC