Insertion junction: CLIP2.057212_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057212
Chromosome:chromosome 10
Location:1278552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426800 (1 of 1) IPR000104//IPR003480 - Antifreeze protein, type I // Transferase mRNA_edge/3'UTR
Cre10.g426850 (1 of 3) PF02458 - Transferase family (Transferase) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTGTCGTCTGCAATCCTAAATTTCTAACATTCAGGAAGTACTTGGG
Internal bar code:AGGATTATGAGAGGCAACTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:975
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGTCAAGGCCTCTTCAA
Suggested primer 2:GGGGTTTTCGGGTTTTCAGC