Insertion junction: CLIP2.057214_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057214
Chromosome:chromosome 15
Location:267290
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801682 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAAGCCAACCGAGTGAACAGGGGGTAGCCGTTCATGCAGTATGTGAG
Internal bar code:CTCTACGGACAATGAGATTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGCTCGGATCCAAGTCC
Suggested primer 2:CTGAGCCGATTTACCCAGCA