Insertion junction: CLIP2.057219_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057219
Chromosome:chromosome 9
Location:3882992
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397993 FAP201 (1 of 31) IPR003590 - Leucine-rich repeat, ribonuclease inhibitor subtype; Leucine Rich Repeat Flagellar Associated Protein 201 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGAGGTTGGTGCCCATGTGTAATGGTGCAGGGCTACACACATGGCGC
Internal bar code:TTTGGTAACCATTTTCAGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:510
LEAP-Seq percent confirming:18.9189
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TATTTGCAGGAAGGCAGCGA
Suggested primer 2:GCTGAGAGCTAGGAGGCATG