Insertion junction: CLIP2.057220_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057220
Chromosome:chromosome 2
Location:575835
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077061 (1 of 1) PTHR22911//PTHR22911:SF27 - ACYL-MALONYL CONDENSING ENZYME-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGCGCTGGTTAAGGTTGTACCATTTCATAAGTCACATCTATGCTGTAA
Internal bar code:GAGCGGTTTCACATTTAGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2952
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCACCAGTTACCCTACC
Suggested primer 2:CTACAGCGCGTGCCATAAAC