Insertion junction: CLIP2.057221_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057221
Chromosome:chromosome 16
Location:7570237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683819 (1 of 2) PF02900 - Catalytic LigB subunit of aromatic ring-opening dioxygenase (LigB) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTCATTGCTTCTTAAGATATGTGCAATTGCTTACTTAAATTGTACAT
Internal bar code:GCCCCTGATCCTAAGTCTTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1617
LEAP-Seq percent confirming:77.4194
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACTCCTCAAACGACACG
Suggested primer 2:GTGACAAACTGACAACCCGC