Insertion junction: CLIP2.057223_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057223
Chromosome:chromosome 9
Location:1621273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398650 (1 of 1) PTHR21737:SF4 - CACTIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACATGCCTGTTACCATCTAGGCATGCCGCAATTACTACCACGGCCCCTC
Internal bar code:GACCCATTATGGCTCTGGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2647
LEAP-Seq percent confirming:96.5909
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATCATTTTCAGCGCGGG
Suggested primer 2:CAGCTCGTGTCTAGGTAGCG