Insertion junction: CLIP2.057223_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057223
Chromosome:chromosome 9
Location:1621279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398650 (1 of 1) PTHR21737:SF4 - CACTIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTTCGGGCTGCGGCTGTGGTGAGCCGTTTGCAGCGGCATGACGCTCT
Internal bar code:GTTCAGACGTGACTGAAATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCGTGTCTAGGTAGCG
Suggested primer 2:CTGATCATTTTCAGCGCGGG