Insertion junction: CLIP2.057226_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057226
Chromosome:chromosome 10
Location:2842141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g439150 RPT5,GEX36 (1 of 1) K03065 - 26S proteasome regulatory subunit T5 (PSMC3, RPT5); 26S proteasome regulatory subunit 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCTGTCCTACTGGCGGCATATCCCTACATCCTAACACATGTATACCC
Internal bar code:GGGAGAAACAAGACGTCACTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:378
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGACCGCAAGATCGAGTT
Suggested primer 2:GATGGCGCAGATGTTTGGTC