Insertion junction: CLIP2.057234_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057234
Chromosome:chromosome 8
Location:2456478
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre08.g372100 HSP70A Heat shock protein 70A; (1 of 1) K03283 - heat shock 70kDa protein 1/8 (HSPA1_8) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCGACAAACGAGCACTTATACATACGCGACTATTCTGCCGCTATAC
Internal bar code:GAGGGTGAAGGGCCTAGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:582
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAAAGGCCACAGCTTA
Suggested primer 2:CACACCAGACCAGACCAGAC