Insertion junction: CLIP2.057241_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057241
Chromosome:plastome
Location:60067
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCAGTAAATAAATTTTATCACCGCAGCTTTGGGTATATAAATAGCAC
Internal bar code:GTTCGGCGATGGGCCAGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:398
LEAP-Seq percent confirming:52.1739
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAAAGGACGCTCTGGTGT
Suggested primer 2:AGGTCCTCGTCTAAGCGCTA