Insertion junction: CLIP2.057244_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057244
Chromosome:chromosome 16
Location:4949403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686500 (1 of 1) PF03767 - HAD superfamily, subfamily IIIB (Acid phosphatase) (Acid_phosphat_B) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAATGCGGTACCAGAAGAGGCTGTAACATTAGTTTGAGGACGAGGTCA
Internal bar code:CCTTGTGAAGGGGTTATCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1107
LEAP-Seq percent confirming:86.7647
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GACTGTGACGGGCAAAGGTA
Suggested primer 2:CGTTGTTGGGCATGTGTTGT