Insertion junction: CLIP2.057245_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057245
Chromosome:chromosome 6
Location:7963279
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800746 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCATTTCCCCAGACTCCATTTCCCCGATGAGGTGCGGGGGCGGCAAG
Internal bar code:GCGACGGCCTGTAGGGTATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1160
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAATTATGCGTTTCCGGC
Suggested primer 2:TGGTCATCGTCTTCACTGCC