Insertion junction: CLIP2.057246_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057246
Chromosome:chromosome 12
Location:6153908
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g535500 (1 of 103) IPR000504 - RNA recognition motif domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTTACAAGAACGGTCGATCTGAGCGTCCAAGCACGCAGCTGAGACTGG
Internal bar code:CTCCACGGGGCCGGCACCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2886
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGATGACACCAGGCTGG
Suggested primer 2:ATAGTAGGGGGCTTGGCAGA