Insertion junction: CLIP2.057261_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057261
Chromosome:chromosome 11
Location:4410120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g483033 (1 of 39) PTHR13078:SF53 - PROTEIN MAOC-1 3'UTR
Cre11.g483100 (1 of 1) IPR019931 - LPXTG cell wall anchor domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGTTTTTGGGGCCCTGGCTAGTCCACGGCTGTCGTCCCACATGTAAC
Internal bar code:CACATCATAGTGATGCGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3956
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCACTTTTCCCTTGCAAG
Suggested primer 2:GGCAACCCAGCTTCAACTTG