Insertion junction: CLIP2.057272_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057272
Chromosome:plastome
Location:92576
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802303 2717010,ChreCp039,rps9 30S ribosomal protein S9; (1 of 2) PTHR21569//PTHR21569:SF1 - RIBOSOMAL PROTEIN S9 // 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAATGCAATTTTCAGGTGGTGAAAATGCAGTTAAATTTGATACTATT
Internal bar code:AGCACTTGACTCGGTCATTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:55
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGGACGGCAATGAACG
Suggested primer 2:TGTGACAAGCATTTTCCCGA