Insertion junction: CLIP2.057277_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057277
Chromosome:chromosome 7
Location:6403386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357700 3'UTR
Cre07.g800876 (1 of 1) PTHR10383:SF9 - TMS1, ISOFORM F 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACTGTAACGTGCACTACCGGCATCCGCGCTCTGAATCTCTGATAGT
Internal bar code:CCACGGTCTCATCATATTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1692
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTTCCTGAACCCGTTA
Suggested primer 2:GCGATGCCTTAGGTCTACCC