Insertion junction: CLIP2.057282_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057282
Chromosome:chromosome 6
Location:3364412
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g800656 (1 of 4) PTHR16222//PTHR16222:SF17 - ADP-RIBOSYLGLYCOHYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAGCTTGACAATAGCTGGTGCGTTACACACACGGTGGCAGCTACGCTG
Internal bar code:ATCCTACTTTGATCTCTTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:556
LEAP-Seq percent confirming:17.7778
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTCCCAACCACCCATAC
Suggested primer 2:CGCGTTGCAGATCTCAATGG