Insertion junction: CLIP2.057283_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057283
Chromosome:chromosome 16
Location:629328
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691950 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCAGCGTGTCGCGTGTGGCCGTGACCAAACCCAAAGCAACATGTGAC
Internal bar code:GTGCAAGGGCTCCATTCGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1418
LEAP-Seq percent confirming:52.9412
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCTTTGTTCGACCGCAA
Suggested primer 2:AGCGGGCGTATAACTGTAGC