Insertion junction: CLIP2.057285_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057285
Chromosome:chromosome 14
Location:3468874
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630500 TIE2 (1 of 1) K15323 - tRNA-splicing endonuclease subunit Sen34 (TSEN34); tRNA-intron endonuclease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCCGAAACATACTCTAGGTGTTAAACCCACCTTCCCGAACACGCGG
Internal bar code:TGTGCAGTTGGCTTTAAGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTTCTTTGCGGGTGTT
Suggested primer 2:CGAGCGGGCTATTGTTTTCG