Insertion junction: CLIP2.057288_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057288
Chromosome:chromosome 3
Location:457215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144947 (1 of 34) IPR000571 - Zinc finger, CCCH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATATGGGCAGCAGCGGCCTCGCGCTATGGCCGCGCCGCTGAGCTCGTG
Internal bar code:TATTTGGTAGGCAGTTTAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:244
LEAP-Seq percent confirming:3.84615
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAATCACGACCCCTCA
Suggested primer 2:GTTAACGGGCAGCTACAGGT