Insertion junction: CLIP2.057296_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057296
Chromosome:plastome
Location:128707
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802317 atpH,ChreCp053,2717044 ATPase III subunit; (1 of 1) K02110 - F-type H+-transporting ATPase subunit c (ATPF0C, atpE) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCCGAAAAATACCCTTTATAGTGCGTTAGCCAATACCAAACAGCCAG
Internal bar code:ATCATCCTTTTGCATCCACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:143
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTCAAGGTACTGCTGC
Suggested primer 2:TGGTTGTGCTCTTGTAGGCA