Insertion junction: CLIP2.057302_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057302
Chromosome:chromosome 17
Location:3146435
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g720750 TRF4 (1 of 3) K03514 - non-canonical poly(A) RNA polymerase PAPD5/7 (PAPD5_7, TRF4); Class-II RNA nucleotidyl transferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGGAACCGAGTCGCGGTGACTGACCCTTTGAGCCGGCACTTCTGCCT
Internal bar code:CCGGACGGGAGTCTATTACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:429
LEAP-Seq percent confirming:53.3333
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACCACTCCTCAGGTAG
Suggested primer 2:GCGTCGTCTCCTCATACAGG