Insertion junction: CLIP2.057304_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057304
Chromosome:chromosome 2
Location:4481465
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106550 (1 of 1) K12839 - survival of motor neuron-related-splicing factor 30 (SMNDC1, SPF30) 3'UTR
Cre02.g800227 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAAGTGCTCACGCACATGCTTCCAATCCCCAATCTTTCACAATCTGCA
Internal bar code:TGCGTCTGGTAGGCATCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2240
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCATCAAGAAGGGCAGCA
Suggested primer 2:AGCGCTCGTATCTTCCTTCG