Insertion junction: CLIP2.057309_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057309
Chromosome:chromosome 2
Location:2965550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095294 (1 of 1) PTHR14187//PTHR14187:SF51 - ALPHA KINASE/ELONGATION FACTOR 2 KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGGGACAATGTGTGCATCTAATAAGCGACCTTCGCTGAGCTTGCCT
Internal bar code:TAGTGAGGGTTAGTCAGGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2096
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTCGGAGCAGATCTCA
Suggested primer 2:CGTCAGCAGGTCCTTCTTGT