Insertion junction: CLIP2.057317_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057317
Chromosome:chromosome 13
Location:4519574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603050 5'UTR
Cre13.g603100 GT90-48,GT90F48 GT90 family protein 48; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGCAGGGTTCGGGTTCGCAGCACACGGTTTCGTGCCCCTAGGTTCC
Internal bar code:ATGTTGCACGGGGATGCGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:84
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGCCGCTTCACATAAG
Suggested primer 2:CAGCGTTTGGAGGTTCAACG