Insertion junction: CLIP2.057323_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057323
Chromosome:chromosome 7
Location:133597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g313100 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTAACCAGAAAGTGTTACTTAGGCGGCATCTGGTGGATGCCGCGCTA
Internal bar code:GTGCGGGCGACGTTTGTTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:586
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGATGATGAAGTCCGTA
Suggested primer 2:CTGGGCTGTAAGTGGGGATG