Insertion junction: CLIP2.057340_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057340
Chromosome:chromosome 11
Location:1837666
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467450 SOM3 S-adenosyl-L-methionine-dependent O-methyltransferase; (1 of 4) PTHR13600//PTHR13600:SF12 - LEUCINE CARBOXYL METHYLTRANSFERASE // LEUCINE CARBOXYL METHYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACGGACCCATGGACCCGCCGCACACCACACACCACACCACACGCAG
Internal bar code:TTCGAGAGCTCTTCGTCATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCAACGAAAACGAGCGG
Suggested primer 2:TGTGTAGTCACTGCGGCATT