Insertion junction: CLIP2.057344_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057344
Chromosome:chromosome 13
Location:962359
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g568200 AXL1 Arabinose chain extension enzyme like protein 1; (1 of 3) PTHR10994//PTHR10994:SF69 - RETICULON // PROLINE-RICH PROTEIN 18 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCCGCCCTCCACACACCCACACCCCGCAGCACCAGCGCCGGCGCCT
Internal bar code:AGGTCTCGGTGTCCGTGATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:558
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCACTCACTCACCCACC
Suggested primer 2:TTTTCACGCAAGGCTAACGC