Insertion junction: CLIP2.057356_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057356
Chromosome:chromosome 6
Location:3554491
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g278124 (1 of 1) PTHR12894//PTHR12894:SF10 - CNH DOMAIN CONTAINING // VAM6/VPS39-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAAATGCTATGGCCGCCACGACGGGAGTGGACGCGCGCAAACGCTAA
Internal bar code:CAAATGCGAAGAAGGGGGCTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:455
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTACCTGTTCCGTACCG
Suggested primer 2:ACATGCCCCTACATACCCCT