Insertion junction: CLIP2.057360_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057360
Chromosome:chromosome 1
Location:6038477
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g042650 (1 of 17) PF13202 - EF hand (EF-hand_5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCATCGCATCAGAGTGCCGTCCCTCCCGCTTCCCTCAGACGGGCGCA
Internal bar code:TGACGCATTCAAAGAGTCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1791
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATCCCGCAATGCTTTCT
Suggested primer 2:CGCCTGCAATCATAACCACG