Insertion junction: CLIP2.057361_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057361
Chromosome:chromosome 13
Location:1475560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801520 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGATATGAAGCAATACAACGTGATTGATTAAATTATATGAACAAGCAG
Internal bar code:TCGCGAGATCAGTCCCCCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1673
LEAP-Seq percent confirming:65.3333
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGCGCGTAACTGTCTTT
Suggested primer 2:GCGGATCACAAGTGAAGGGA