Insertion junction: CLIP2.057362_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057362
Chromosome:chromosome 5
Location:3524052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233600 DIV55 [RNA-polymerase]-subunit kinase / CTD kinase; (1 of 13) 2.7.11.23 - [RNA-polymerase]-subunit kinase / CTD kinase 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGTAACGAGCCGTTGGGTCTTAGGCACAGCCGAAATCCCCTGGCGC
Internal bar code:GGGGGGTCGGTCGGTTTCCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAGTCGCTGATGTTCTGT
Suggested primer 2:CTGCTATGTAACCGCAACGC