Insertion junction: CLIP2.057363_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057363
Chromosome:chromosome 8
Location:1146798
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g362950 (1 of 3) IPR002202 - Hydroxymethylglutaryl-CoA reductase, class I/II CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGGCTGGAGGTGCCGCCGGCCAGCGCGGTGTAGGTGGCGTAGCCGG
Internal bar code:CATCATTGGGCGAGTAGCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:737
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTGCATGGTTCACGCTT
Suggested primer 2:GGAGAAGGAGAAGGTGACGC