Insertion junction: CLIP2.057364_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057364
Chromosome:chromosome 12
Location:3124271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801389 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAAGGCCCCGTGCACCGTAATGAACCGCATGAGCAGCTTTACAGGGGC
Internal bar code:TCGAAGTCCACTAATTCTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:811
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCCTTCGTGATTCGTCA
Suggested primer 2:TTTTGTGTGGCCTGCGAATG