Insertion junction: CLIP2.057370_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057370
Chromosome:chromosome 17
Location:5377406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738350 PGA5,LPAAT2 ER 1-acyl-sn-glycerol-3-phosphate acyltransferase; (1 of 2) PTHR10434 - 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTTCTTTCCGCCATACCGCTCTCTGGAACTCCAACCAGCCGCCGTGT
Internal bar code:GCAGCTTGGTCCCGTCGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1873
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGCCTGGAGGATCTCAA
Suggested primer 2:GCTGCAACGTATGGCATCAG