Insertion junction: CLIP2.057372_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057372
Chromosome:chromosome 4
Location:3069723
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre04.g225350 (1 of 3) IPR002483 - PWI domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGACTTCCGCCCCTCAGCCGGCCACAGGAAAATTGAGAGGCCAGC
Internal bar code:CGCGCCCTATATGGATGCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:829
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACAGGGGTTAAAGCGGG
Suggested primer 2:GGAATATCAACACGCGCACC