Insertion junction: CLIP2.057374_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057374
Chromosome:chromosome 1
Location:8155174
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g068377 (1 of 1) K14771 - U3 small nucleolar RNA-associated protein 19 (NOC4, UTP19) 3'UTR
Cre01.g068742 (1 of 4) PF01424 - R3H domain (R3H) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGGCCCGAAAGTTTGTGACACACCTAAAACTGTTTTCGAAGATTTAAC
Internal bar code:CGATTGCAAGGAATAAGTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3305
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAGTATTGACCGACCCG
Suggested primer 2:TTCAGGACACGTGTAACCGG