Insertion junction: CLIP2.057391_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057391
Chromosome:chromosome 9
Location:5532095
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g409250 GTR24 (1 of 1) PTHR12726//PTHR12726:SF0 - CERAMIDE GLUCOSYLTRANSFERASE // CERAMIDE GLUCOSYLTRANSFERASE; putative Glycosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGGGTTGCGTGCATGTCCATAGCGCATACACACGTTCCGTTGTTCG
Internal bar code:AGGTATGCCGGACATAGGACGC

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AATGAGTCGGTTGTGGGGTC
Suggested primer 2:TTCACCCCTGCGTAACACTC