Insertion junction: CLIP2.057393_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057393
Chromosome:chromosome 1
Location:5769907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041351 (1 of 1) PTHR15967:SF0 - E2F-ASSOCIATED PHOSPHOPROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTGGTGACCGGTGATGGATTGCAGGTAGTGGGCGGCTCGTGGGTTCT
Internal bar code:TGGACTTTGCGGGACTCTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3275
LEAP-Seq percent confirming:68.9655
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTCTGGCCGAGGACTAT
Suggested primer 2:GGCGCAATATGTGACGTCAC