Insertion junction: CLIP2.057398_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057398
Chromosome:chromosome 4
Location:2859239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224350 MOT55 Predicted protein; (1 of 22) PTHR10994 - RETICULON 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGACAAGAGTCGTGACCAATTGTCAGACGGCAATGAACGAGAGCACAA
Internal bar code:TGGGCCGCGCTAGCATGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGATGTCCCAATGTCCAA
Suggested primer 2:CACGTACTTCATGGCATGCG