Insertion junction: CLIP2.057398_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057398
Chromosome:chromosome 4
Location:2859276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224350 MOT55 Predicted protein; (1 of 22) PTHR10994 - RETICULON 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCAGCACAAAATCTCAAGGACATATGCGTTGTGCCAGCAGTGTTTTC
Internal bar code:TGGGCCGCGCTAGCATGGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:851
LEAP-Seq percent confirming:19.2308
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTACTTCATGGCATGCG
Suggested primer 2:CCCGATGTCCCAATGTCCAA