Insertion junction: CLIP2.057414_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057414
Chromosome:chromosome 7
Location:2053409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325812 MAW1,ZYS2 Membrane-associated hydroxyproline-rich glycoprotein 1; (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCATTCAGCATAGAAGCCTACTAGATCCCCAAGGCCTTTTACTACCAG
Internal bar code:CACTGCACGTTACGAGCTGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTACAACGTGCAGATGCT
Suggested primer 2:AGGGGATCTAGGCTGAAGCA