Insertion junction: CLIP2.057416_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057416
Chromosome:chromosome 3
Location:4582825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176450 (1 of 17) IPR029069 - HotDog domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCTCAAAAGCACGCTGTTTTAAGGAAAGGCGAAAGCTGTCCGGCAAA
Internal bar code:CGAGTGTGGTGCATATAACACG

Confirmation - LEAP-Seq

LEAP-Seq distance:238
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAATGAGCTGCTGCGGATTC
Suggested primer 2:GTGCTGCACAGACCTTGTTG