Insertion junction: CLIP2.057419_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057419
Chromosome:chromosome 10
Location:5478684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTTGAAGCTGGACTCTTGCCAGGACTCTTTCCAGGGTTATCGTCGGGC
Internal bar code:CCTATCGTTGAACATTCTCGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5089
LEAP-Seq percent confirming:70.6522
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCACGATGTTGGAGTCCT
Suggested primer 2:AGTCCATGCCCACATCAGTG