Insertion junction: CLIP2.057435_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057435
Chromosome:chromosome 1
Location:2263654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012650 KCN9 (1 of 4) IPR000595//IPR002110//IPR005821//IPR018490//IPR020683 - Cyclic nucleotide-binding domain // Ankyrin repeat // Ion transport domain // Cyclic nucleotide-binding-like // Ankyrin repeat-containing domain; Voltage-gated potassium channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCACAAGGGAAACATTACGCGTAGGACAGTGTATGCGATGCCTATTCT
Internal bar code:GCTATAGTGACTGTCCTCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1360
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TATTGTTGGACCACGGAGCC
Suggested primer 2:CACACAGCAGCAACAGTGAC