Insertion junction: CLIP2.057436_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057436
Chromosome:chromosome 3
Location:101952
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143787 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAATGTCATGCTTCCCAGTACCTAAGCATCTTCCTTAAGCTCGCTACCG
Internal bar code:TAGGCTGAAAGGGAGCTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2117
LEAP-Seq percent confirming:59.4203
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTTTCCTTGGTGTGAC
Suggested primer 2:CCCATGCATCTGAACCCTGT