Insertion junction: CLIP2.057447_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057447
Chromosome:chromosome 1
Location:6710136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047950 IFT27,Rabl4,FAP156 (1 of 1) K07934 - intraflagellar transport protein 27 homolog (IFT27, RAYL, RABL4); Intraflagellar transport protein 27 3'UTR
Cre01.g048000 TPM1 Tropomyosin 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTGACCCCATGCCACACCGGAATGCGGACCCCCCGACCGACCGCCCCG
Internal bar code:CTCGGGGCCGTGGAACGTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2268
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCTTCTACCGCAACT
Suggested primer 2:ACTCCTACAGCAGCAGCAAG